Insertion junction: LMJ.RY0402.047370_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.047370
Chromosome:chromosome 9
Location:2738432
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g389450 (1 of 1) IPR000104//IPR000504//IPR003613//IPR012677//IPR013083//IPR016024//IPR020683 - Antifreeze protein, type I // RNA recognition motif domain // U box domain // Nucleotide-binding alpha-beta plait domain // Zinc finger, RING/FYVE/PHD-type // Armadillo-type fold // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTTTGGCAGGCCGCCGTCTGCTGCATCC
Internal bar code:CCGTCCGTGCGGACGACGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:249
LEAP-Seq percent confirming:78.4075
LEAP-Seq n confirming:5160
LEAP-Seq n nonconfirming:1421
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGCGATTTAGGTGTCA
Suggested primer 2:GGAAACACACCGGCTACTGT