Insertion junction: LMJ.RY0402.047525_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.047525
Chromosome:chromosome 3
Location:2468912
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g159550 (1 of 7) IPR011989//IPR016024 - Armadillo-like helical // Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCGGTATGCACAAGTGGCCAATTAGGCT
Internal bar code:TGTCAATCGGGTTGGACCCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1166
LEAP-Seq percent confirming:99.5257
LEAP-Seq n confirming:2518
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTGGACGCTTCTTTTGT
Suggested primer 2:TTTTGGATGAGGAGGATTGC