Insertion junction: LMJ.RY0402.047597_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.047597
Chromosome:chromosome 9
Location:2022014
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g394400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGTGCATGTTGCTGGATGCGCTCTTTT
Internal bar code:CTCACTCGGTCAAAGAGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:158
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:121
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGAATGCATGTGTGCCAT
Suggested primer 2:TGGAGGAGGGTACGAGTGAG