Insertion junction: LMJ.RY0402.047632_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.047632
Chromosome:chromosome 12
Location:4488383
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g521700 SSS6,SSS1A Soluble starch synthase IA; (1 of 5) K00703 - starch synthase (E2.4.1.21, glgA) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGCGCGGCAGTGGGAGAGCGTGATCGA
Internal bar code:TACGCCACCTAGGCAGTGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:513
LEAP-Seq percent confirming:98.996
LEAP-Seq n confirming:493
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCACCAACAACCAGGACT
Suggested primer 2:ACCCAGTCACGGAATAGACG