Insertion junction: LMJ.RY0402.047679_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.047679
Chromosome:chromosome 9
Location:3746162
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g391282 XYT1 (1 of 1) K03714 - glycoprotein 2-beta-D-xylosyltransferase (E2.4.2.38); Xylosyl transferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGCGGCCTCTGCCTGCCTTTTTTGCCAA
Internal bar code:CGGGCTAGCTCGGGTGGACAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:115
LEAP-Seq percent confirming:4.42994
LEAP-Seq n confirming:129
LEAP-Seq n nonconfirming:2783
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACTACCACAACATCGC
Suggested primer 2:CGTGTTCCTACGTGTGTTGG