Insertion junction: LMJ.RY0402.047716_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.047716
Chromosome:chromosome 9
Location:3647698
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g390430 (1 of 1) K13108 - smad nuclear-interacting protein 1 (SNIP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTGGAGGAGAGGGGCCGCTGCAGGAGC
Internal bar code:GATTCCCCGGCCCTTATGCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:515
LEAP-Seq percent confirming:82.2884
LEAP-Seq n confirming:10644
LEAP-Seq n nonconfirming:2291
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAGTCTTCACGCAAGTC
Suggested primer 2:GATATGCGGATACGGGTTTG