Insertion junction: LMJ.RY0402.048019_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.048019
Chromosome:chromosome 12
Location:2587901
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g505150 OPR52 (1 of 781) IPR000104 - Antifreeze protein, type I; OctotricoPeptide Repeat protein 52 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGGTGACCACAGCCACAACCGCGGCGT
Internal bar code:GTGAAGTTGCTGGGTCGCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:696
LEAP-Seq percent confirming:97.7825
LEAP-Seq n confirming:2293
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTGTCTAGCTGACCACC
Suggested primer 2:GCAAGTGAGGAATAGCCTGC