Insertion junction: LMJ.RY0402.048021_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.048021
Chromosome:chromosome 3
Location:7665084
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g204050 ELG6 Exostosin-like glycosyltransferase 6; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGGCAAAGCTTGGCATTTCTAGGAAA
Internal bar code:TGAATATAGGACACAAAAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:634
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCCCTGACTGAGATGTG
Suggested primer 2:GTGTTGGGCTGTTTATGCCT