Insertion junction: LMJ.RY0402.048087_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.048087
Chromosome:chromosome 3
Location:8842887
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g206817 (1 of 2) IPR001739//IPR016177 - Methyl-CpG DNA binding // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATCCTCCTTGCAGTCCGCCACTACGCT
Internal bar code:CCAAGCATCTGCCTGGCGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:781
LEAP-Seq percent confirming:98.132
LEAP-Seq n confirming:2469
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCAGTTACGCCGAGCTGT
Suggested primer 2:TGAGTTCAATGGGGAGGTTC