Insertion junction: LMJ.RY0402.048201_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.048201
Chromosome:chromosome 16
Location:506276
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g692902 AHI1 Abelson-helper integration site 1; (1 of 3) PTHR22847:SF361 - JOUBERIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACCTTCGCGACACGGCTGCCCTCACAC
Internal bar code:AGAACGGATGGACCCATATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:374
LEAP-Seq percent confirming:46.5564
LEAP-Seq n confirming:1548
LEAP-Seq n nonconfirming:1777
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGGATCAAGGAGGACCAACT
Suggested primer 2:TGTCGAGTTGACCTACGCAC