Insertion junction: LMJ.RY0402.048221_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.048221
Chromosome:chromosome 16
Location:5851237
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g677650 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGACTTTTTCGCCAGTTGCGCAAACAT
Internal bar code:ATATGCAGGATGAGGAGTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:899
LEAP-Seq percent confirming:98.3931
LEAP-Seq n confirming:4225
LEAP-Seq n nonconfirming:69
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAATTTGGTGGCATGTGA
Suggested primer 2:CGTTCTGCTTTTCGGAAGTC