Insertion junction: LMJ.RY0402.048378_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.048378
Chromosome:chromosome 12
Location:4857081
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g525050 SMC6A (1 of 2) PTHR19306//PTHR19306:SF6 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // PROTEIN C23H4.6, ISOFORM A-RELATED; Structural Maintenance of Chromosomes protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCTTCATAGCCTCGTCCACCAGCGCCT
Internal bar code:AATAAGCGCGCATCATTGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:734
LEAP-Seq percent confirming:97.9715
LEAP-Seq n confirming:3912
LEAP-Seq n nonconfirming:81
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTCACACTGATGTAGGC
Suggested primer 2:ATGTGTGTGCGTCTGGGTTA