Insertion junction: LMJ.RY0402.048462_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.048462
Chromosome:chromosome 10
Location:3644854
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g445650 SMC3 (1 of 1) K06669 - structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) (SMC3, CSPG6); Structural Maintenance of Chromosomes protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACGTGCCAGACCCCATGCCCCGAAATCC
Internal bar code:GATTTGTGCACAAGGATGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:805
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTTGGCATTCCAGTGTC
Suggested primer 2:ACCCTAGAGCGCACAAGAAA