Insertion junction: LMJ.RY0402.048533_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.048533
Chromosome:chromosome 17
Location:2113022
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g712400 TERC1,TERC Thylakoid protein integration factor; (1 of 1) PTHR30238:SF0 - PROTEIN PIGMENT DEFECTIVE 149 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACCTGCTCTGTCATACAGTCACAGGTA
Internal bar code:CGTCGGGGCGCATCTATAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:841
LEAP-Seq percent confirming:99.695
LEAP-Seq n confirming:9805
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGTTGGTGCCGTCGTATT
Suggested primer 2:GCACGGGAGGACAGTGTATT