Insertion junction: LMJ.RY0402.048630_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.048630
Chromosome:chromosome 3
Location:8204642
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g200000 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATGCCGCTGTCCGCTGGGTGTACGCCAG
Internal bar code:AGGGAGTCGGGTTCTACGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:542
LEAP-Seq percent confirming:60.8407
LEAP-Seq n confirming:1650
LEAP-Seq n nonconfirming:1062
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGGAAGCGGTGTAGCTC
Suggested primer 2:CGCTCGTGTAAGGCAACATA