Insertion junction: LMJ.RY0402.048684_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.048684
Chromosome:chromosome 8
Location:4867053
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g384800 (1 of 2) 3.1.1.81 - Quorum-quenching N-acyl-homoserine lactonase / Quorum-quenching N-acyl homoserine lactone hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCACACAGGGTCGCGCTCCACAAGACCG
Internal bar code:CATATTAGTTTTTGTATGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:861
LEAP-Seq percent confirming:99.6135
LEAP-Seq n confirming:2835
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAAGCCTGACCCTATTGA
Suggested primer 2:CTCAGCACTGTGTCCACCAC