Insertion junction: LMJ.RY0402.048706_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.048706
Chromosome:chromosome 9
Location:2533777
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390957 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTTCGACTGCTTGTATGTGTGCACGCCA
Internal bar code:CGTGTTGCCCGCATTCGTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:971
LEAP-Seq percent confirming:97.3974
LEAP-Seq n confirming:4341
LEAP-Seq n nonconfirming:116
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTTGCAGATACGGTGAA
Suggested primer 2:CATATGCTCGGTGTGTGACC