Insertion junction: LMJ.RY0402.048809_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.048809
Chromosome:chromosome 1
Location:1525870
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g007901 (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN CDS|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGAACCTGTTGTGCAGGCGTGACCCA
Internal bar code:CCTTATGCTGCGACTGCTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:79
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTATTTTGCGGTGTACT
Suggested primer 2:GAATGTGTGGTACGTGTCGG