Insertion junction: LMJ.RY0402.048859_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.048859
Chromosome:chromosome_17
Location:3953296
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre17.g728600 antisense 5'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):TCCGCGCACTGGGACACAGCGCCCTTGAAC
Internal bar code:TAGATACCCGTATCTTCCGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:307
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:473
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCTGTGCATGTGATAG
Suggested primer 2:GCTCGTATGCGATCTTAGGC