Insertion junction: LMJ.RY0402.048875_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.048875
Chromosome:chromosome 3
Location:5284323
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g183550 (1 of 3) PTHR15160//PTHR15160:SF4 - VON HIPPEL-LINDAU PROTEIN // PROTEIN F23H11.5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCTGGGTGCCCCTTCTACGTTGCTCAG
Internal bar code:TAGACTCATAGTCGGGGTCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:99.8214
LEAP-Seq n confirming:559
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGGTGGACATGGTTGGGA
Suggested primer 2:CCCTCTCTTTCTGCTTGTGG