Insertion junction: LMJ.RY0402.048896_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.048896
Chromosome:chromosome 16
Location:732849
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g691050 (1 of 1) PF08381 - Transcription factor regulating root and shoot growth via Pin3 (BRX) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTGGCAGCGGGGAGAGTTTCACTCGCA
Internal bar code:GCACTCGGGGCAAAGACAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:835
LEAP-Seq percent confirming:83.7311
LEAP-Seq n confirming:12455
LEAP-Seq n nonconfirming:2420
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTTCTCCATTGGGCCAG
Suggested primer 2:CAGGCCATACTGGGAACACT