Insertion junction: LMJ.RY0402.048899_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.048899
Chromosome:chromosome 9
Location:6876933
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g410100 putative Cation-transporting ATPase; (1 of 2) PF00122//PF00689//PF00690//PF00702//PF13246 - E1-E2 ATPase (E1-E2_ATPase) // Cation transporting ATPase, C-terminus (Cation_ATPase_C) // Cation transporter/ATPase, N-terminus (Cation_ATPase_N) // haloacid dehalogenase-like hydrolase (Hydrolase) // Cation transport ATPase (P-type) (Cation_ATPase) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTAGTGAGCGACTTCCCGCCCGTTGACT
Internal bar code:AGTTTTCGCCGGAGTAGTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:599
LEAP-Seq percent confirming:99.6503
LEAP-Seq n confirming:31346
LEAP-Seq n nonconfirming:110
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGGAAGTTCTGAAACCCT
Suggested primer 2:ACGATGACTCCCAGGATGAG