Insertion junction: LMJ.RY0402.048941_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.048941
Chromosome:chromosome 3
Location:4577490
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g176900 (1 of 2) 2.1.1.282//2.5.1.114 - tRNA(Phe) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))- methyltransferase / tRNA-yW synthesizing enzyme-3 // tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase / tRNA-yW synthesizing enzyme-2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGGACGAAGGTGTTTGCGGAAGGTCAT
Internal bar code:GAATACCCGAACGTGGGGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:158
LEAP-Seq percent confirming:83.4483
LEAP-Seq n confirming:3267
LEAP-Seq n nonconfirming:648
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCCAAAGCTGTAGATTA
Suggested primer 2:ACTGCATCAGCACAAGCAAC