Insertion junction: LMJ.RY0402.048954_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.048954
Chromosome:chromosome 17
Location:3158799
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g721750 ELG9 Exostosin-like glycosyltransferase 9; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGTCACCCGGGGTGGTACGGCACAGAC
Internal bar code:CCGGACCTCCAAGCGAATGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:947
LEAP-Seq percent confirming:97.6906
LEAP-Seq n confirming:4780
LEAP-Seq n nonconfirming:113
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACTCCCAACGCACATA
Suggested primer 2:ACAGGAAGCGGTTTCTCTCA