Insertion junction: LMJ.RY0402.049004_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.049004
Chromosome:chromosome 9
Location:476858
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g404250 SRR29, CEP9,CEP9 Cysteine endopeptidase; (1 of 1) PF00112//PF01476//PF07645 - Papain family cysteine protease (Peptidase_C1) // LysM domain (LysM) // Calcium-binding EGF domain (EGF_CA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTGGAGGTGAACGAATGGATGCAGGGTG
Internal bar code:ACGCTAAGCCCGTGCCGGTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:473
LEAP-Seq percent confirming:97.1014
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCGGTATTACTGTCGGT
Suggested primer 2:AGTCTGCGTCAGTGTTGGTG