Insertion junction: LMJ.RY0402.049094_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.049094
Chromosome:chromosome 17
Location:2691482
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g717850 PHC8 (1 of 1) IPR003882//IPR024616//IPR027417 - Pistil-specific extensin-like protein // Pherophorin // P-loop containing nucleoside triphosphate hydrolase; Pherophorin-chlamydomonas homolog 8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCTGAGGTGCGACAGGTGTGCCAGGTG
Internal bar code:CCTGATCGGCGAATGTCGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:696
LEAP-Seq percent confirming:10.8608
LEAP-Seq n confirming:1591
LEAP-Seq n nonconfirming:13058
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTGTGTGGTTCCATCCT
Suggested primer 2:AGTGAGGTGCCACGGATAAC