Insertion junction: LMJ.RY0402.049181_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.049181
Chromosome:chromosome 16
Location:5904571
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g677100 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGAGTCGAGAACGCGGCGGCATTGAAC
Internal bar code:GCTAGCTGTGTCTCTCTTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:780
LEAP-Seq percent confirming:99.5439
LEAP-Seq n confirming:2619
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGATGAGGATAGCGGTG
Suggested primer 2:ATGACTGCTCGCTTCTTGGT