Insertion junction: LMJ.RY0402.049380_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.049380
Chromosome:chromosome 2
Location:3764255
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g095350 DNK1,CGL116 Conserved in the Green Lineage; (1 of 1) PTHR10513 - DEOXYNUCLEOSIDE KINASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCGCACAGCAGGCCAGTAGCCAGCAGG
Internal bar code:GTGCGAGCCGTGATAGGAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:215
LEAP-Seq percent confirming:49.3349
LEAP-Seq n confirming:2522
LEAP-Seq n nonconfirming:2590
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AATAGCGGAGCACAGGAAGA
Suggested primer 2:GCTGTACCCAACCATCGAGT