Insertion junction: LMJ.RY0402.049583_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.049583
Chromosome:chromosome 7
Location:4389213
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g341000 (1 of 4) IPR017956//IPR020478 - AT hook, DNA-binding motif // AT hook-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGTCGGAAATACGGTAATGAGCAACCG
Internal bar code:AATTTGAGTAAGTTTGGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:417
LEAP-Seq percent confirming:97.9779
LEAP-Seq n confirming:1066
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCACCCTGGATCTCAT
Suggested primer 2:GCAAATGCTCGAGTAGAGGG