Insertion junction: LMJ.RY0402.049624_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.049624
Chromosome:chromosome 5
Location:923017
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g247250 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGACCGTGCTAGGCAGAAACATCGGTTA
Internal bar code:GCGATGGTTTCTACCGAAACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:89.2739
LEAP-Seq n confirming:541
LEAP-Seq n nonconfirming:65
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCACACCTTACGTCCTTA
Suggested primer 2:CGTCGTCTGTGTAACATGGG