Insertion junction: LMJ.RY0402.049628_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.049628
Chromosome:chromosome 9
Location:3326755
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g388430 (1 of 2) IPR000104//IPR001202 - Antifreeze protein, type I // WW domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTGTGCGTGCAGTGCGGGATGAAAGCT
Internal bar code:AGACCGGGGCGGGCACAGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:344
LEAP-Seq percent confirming:87.9245
LEAP-Seq n confirming:233
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAGTCGCAGGAGAAAGCG
Suggested primer 2:ATGAACGTACGGATGAAGGC