Insertion junction: LMJ.RY0402.049677_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.049677
Chromosome:chromosome 1
Location:6107478
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g043550 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAACCTGTCCAGCCGCGCGCCCAGCCCC
Internal bar code:ACAGGGTGCGTCTCGGAGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:792
LEAP-Seq percent confirming:98.8506
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCCGCCAGAACTACTAC
Suggested primer 2:TAGCGCGATGATGTGTAAGC