Insertion junction: LMJ.RY0402.049680_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.049680
Chromosome:chromosome 3
Location:7919366
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g202300 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCATCCCCGATTTCTACGAATACTACCG
Internal bar code:TGTATAGAGGGTTATGCGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:629
LEAP-Seq percent confirming:99.4611
LEAP-Seq n confirming:1292
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTAGCTCGGATGAGGAGG
Suggested primer 2:CTGAGCCTTTTGAAGTTGCC