Insertion junction: LMJ.RY0402.049927_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.049927
Chromosome:chromosome 8
Location:2662437
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g373150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCGGACTGCGGCAACGGCGCCACCCTG
Internal bar code:TACTTGCAGTGTAGTTCACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:707
LEAP-Seq percent confirming:13.6364
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGACACACACGACTCAGCAA
Suggested primer 2:CCAACCTGGACTACTCGCTC