Insertion junction: LMJ.RY0402.049998_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.049998
Chromosome:chromosome 11
Location:2452284
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g475450 (1 of 1) K11863 - Ataxin-3 (ATXN3, MJD) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAATAGTACACCGTATAATTCAAACCA
Internal bar code:GCCGTGCGAACAGGCTGGACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1024
LEAP-Seq percent confirming:99.1491
LEAP-Seq n confirming:2913
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGGGCACTTTTGCTAGG
Suggested primer 2:TATTTCACCGGCATGAGACA