Insertion junction: LMJ.RY0402.050029_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.050029
Chromosome:chromosome 13
Location:2450982
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g579850 (1 of 1) PTHR10984//PTHR10984:SF25 - ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN // ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTAGCTCTATGCACTTAAGAGAACTTGC
Internal bar code:ACGGGAGCTTTAATTGTTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:414
LEAP-Seq percent confirming:84.5611
LEAP-Seq n confirming:9700
LEAP-Seq n nonconfirming:1771
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGCATGTTCCAGTACTTT
Suggested primer 2:CTCACGGCTGTAGTCACGAA