Insertion junction: LMJ.RY0402.050188_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.050188
Chromosome:chromosome 1
Location:113889
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g000800 CGL136 Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAAGCCACATTGTTCACGCACACTTGCA
Internal bar code:CTCGGCCAGATAGGAGATATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:696
LEAP-Seq percent confirming:99.3827
LEAP-Seq n confirming:483
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTGACGGACCACAAAAG
Suggested primer 2:GTCTTTTGAGCGGCGATAAG