Insertion junction: LMJ.RY0402.050399_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.050399
Chromosome:chromosome_16
Location:6280164
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre16.g674700 AGH1 sense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):ATGTCGTTGGCAACCAAGACCGTGTGAAAT
Internal bar code:TCTGGACCTGTAAACAAGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:283
LEAP-Seq percent confirming:99.8712
LEAP-Seq n confirming:2326
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GATTCCCTTTCCTTTCCAGC
Suggested primer 2:AGTATGGGTTTGAGGATGCG