Insertion junction: LMJ.RY0402.050406_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.050406
Chromosome:chromosome 2
Location:4918684
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g103650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGTATCCGCACGAGAGTAGCGATTTT
Internal bar code:CACCTTTGCGCTTGTGCTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1154
LEAP-Seq percent confirming:99.3411
LEAP-Seq n confirming:5126
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTAACATGCAAACGCAGAGC
Suggested primer 2:CCACGCCAATTTTTCATCTT