Insertion junction: LMJ.RY0402.050509_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.050509
Chromosome:chromosome 11
Location:2929440
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g478050 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCGACTCGTGCTGTCGCATGGAGATCGA
Internal bar code:CCTGCGCGGACGGGCCTTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:537
LEAP-Seq percent confirming:99.7664
LEAP-Seq n confirming:8116
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGGTACCATATCAGCGA
Suggested primer 2:TTGCAGCTGATTATTGCGAC