Insertion junction: LMJ.RY0402.050693_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.050693
Chromosome:chromosome 9
Location:2118908
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAAGACCGTTCCGGGCCGCCCCCCACAA
Internal bar code:CATTGGCTTTTATATTTGCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:584
LEAP-Seq percent confirming:83.8223
LEAP-Seq n confirming:6228
LEAP-Seq n nonconfirming:1202
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCACCTCTCATTCCACTC
Suggested primer 2:CTCCTTACTCCAGGAAGCCC