Insertion junction: LMJ.RY0402.050855_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.050855
Chromosome:chromosome 17
Location:3482492
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGGACGACAGGGCCAGCGGCAGGGGCC
Internal bar code:GGGTACAGTGAGTCTCGACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:427
LEAP-Seq percent confirming:99.8093
LEAP-Seq n confirming:1047
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CATGACTGAGTGTGGGCAAC
Suggested primer 2:AGGTGGGAGTTGTGCGTTAC