Insertion junction: LMJ.RY0402.050863_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.050863
Chromosome:chromosome 5
Location:1010345
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g246551 (1 of 1) IPR000104//IPR001810//IPR020683 - Antifreeze protein, type I // F-box domain // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAACCACCACCCCGGTGCATCCTGTACCG
Internal bar code:TCCAACTATGGCCGCGACGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:94.8417
LEAP-Seq n confirming:809
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCCAAACTAAACCAAA
Suggested primer 2:TGTCTCATGCCAGCTAATGC