Insertion junction: LMJ.RY0402.050870_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.050870
Chromosome:chromosome 3
Location:1563187
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g152450 (1 of 1) PTHR23308:SF2 - KANADAPTIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGATTGGAGGCGTGGCAGTGCGGCACG
Internal bar code:CGACAGATGTCAGGGTGGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:12
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCACGTTTAACACCCAA
Suggested primer 2:GAAACGCCTTACCTCCATGA