Insertion junction: LMJ.RY0402.050929_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.050929
Chromosome:chromosome 13
Location:1406098
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g571950 (1 of 1) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAATGCTTCCCCTTCCCAGCCATAGCCCG
Internal bar code:TGGTCCTTTTTATCTCGCGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1047
LEAP-Seq percent confirming:98.7356
LEAP-Seq n confirming:859
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGTTCTACGGCAAAGTG
Suggested primer 2:ATTGGAGACAATGGAGCTGG