Insertion junction: LMJ.RY0402.050931_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.050931
Chromosome:chromosome 3
Location:8220008
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g199800 HYD1,HYDA1 (1 of 2) 1.12.7.2 - Ferredoxin hydrogenase / Uptake hydrogenase; Iron hydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCATCCGCAGTTCCTTTCCATTGTAAG
Internal bar code:CTGGCTCTGCCGGGCGATCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:629
LEAP-Seq percent confirming:75.745
LEAP-Seq n confirming:915
LEAP-Seq n nonconfirming:293
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTAGGCACGTACATGTTG
Suggested primer 2:CCGTTATGTGTCGTCAAACG