Insertion junction: LMJ.RY0402.050939_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.050939
Chromosome:chromosome 17
Location:1253639
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g705300 PHC68 Putative pherophorin-chlamydomonas homolog; (1 of 6) 3.2.1.4 - Cellulase / Endoglucanase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTGCCCTCTGCCCTTCTCACTACCCGC
Internal bar code:CTTGCAGATTTTTAGGATGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:341
LEAP-Seq percent confirming:99.7477
LEAP-Seq n confirming:13048
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCATCCTTTCCCCTTCC
Suggested primer 2:ATTGATCCGCCCCCTTATAC