Insertion junction: LMJ.RY0402.050949_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.050949
Chromosome:chromosome 9
Location:1548991
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g397803 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTCAAGCCAGTCACACTCGCAACCTCC
Internal bar code:CGCCCGCTTCCCAAATCTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:28
LEAP-Seq percent confirming:98.7342
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCAGCGGGAGTTCCTAGA
Suggested primer 2:TCACATCCTGGAAAATGCAA