Insertion junction: LMJ.RY0402.051011_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.051011
Chromosome:chromosome 9
Location:1879332
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g395500 HEATR2,HTR2A,HEATR2A,DNAAF5 5-Hydroxytryptamine Receptor 2A; (1 of 3) IPR016024//IPR021133 - Armadillo-type fold // HEAT, type 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGAATAATGTGAAAGAGCTCACCTGCTC
Internal bar code:GGCCCGAAATAACAACCCGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:740
LEAP-Seq percent confirming:87.882
LEAP-Seq n confirming:4112
LEAP-Seq n nonconfirming:567
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTTAACCCTGCACCCAGAAC
Suggested primer 2:TCGTTGGTTATGAGAAGGGC