Insertion junction: LMJ.RY0402.051027_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.051027
Chromosome:chromosome 17
Location:4966826
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g734644 SQE1,SQE Squalene epoxidase; (1 of 1) 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATTCAAAACCGCGGCGCTTCCTCACACT
Internal bar code:TGGGAAGACCAGGACTCTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1215
LEAP-Seq percent confirming:48.8523
LEAP-Seq n confirming:1660
LEAP-Seq n nonconfirming:1738
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGACAGTGGTAAGGCAG
Suggested primer 2:TTTTACACCGTATCCAGCCC